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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36832241_36833282_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36832241 - 36833282

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCTGTT

5'SS Class:

major

3'SS Sequence:

AAAAATATCTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTGACATAATT

Flanking Amino Acid:

TNWCIDRNLQVSLLAVDEMH

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.4

68.2

42.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

48.6

-0

1.1

46.9

43.6

Minor 5ss

39.1

-1.2

3.5

58.6

Minor BPS

52.8

0.17

1.9

74.85

41.7

Associated Gene:

Gene:

BEST3

Ensembl Gene ID:

ENSAPLG00000012990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013543

36829052 - 36845601

16550