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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3686027_3687255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3686027 - 3687255

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

CTGTTCTTCACA

Flanking Amino Acid:

ILNLVSDPGTGVVVNGQLIG

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

74.9

35.1

Major BPS

50.8

0.02

1.5

37.5

Major PPT

80.9

0.69

0.8

75.7

32.9

Minor 5ss

32.9

-1.9

3.7

43.1

45.5

Minor BPS

61.6

0.36

1.8

70.13

42.8

Associated Gene:

Gene:

ITIH2

Ensembl Gene ID:

ENSAPLG00000008497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024909

3663133 - 3689761

26629

ENSAPLT00000008921

3663109 - 3689761

26653

ENSAPLT00000029405

3667386 - 3689761

22376