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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36924854_36924977_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36924854 - 36924977

Intron Length:
124

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGTAT

5'SS Class:
major

3'SS Sequence:
TTTTTTTCTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GAATTAT

U12 Branch Point Sequence:
TGAGAATTATGT

Flanking Amino Acid:
VVIFPSTTTAALQKTTVSQS

Intron Amino Acid Position:
393

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
68.7
38.6

Major BPS
59.2
0.23
1.3
52
43.5

Major PPT
97
1.06
0.5
96.7
11.4

Minor 5ss
37.4
-1.4
3.5
55.6
48.6

Minor BPS
39.6
-0.7
2.2
55.82
45.5

Associated Gene:

Gene:
MYRFL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36909376 - 36936506
27131