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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36925140_36929199_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36925140 - 36929199

Intron Length:
4060

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTAAGTTGA

5'SS Class:
major

3'SS Sequence:
CCTTATCTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGGAT

U12 Branch Point Sequence:
TATACCTTATCT

Flanking Amino Acid:
IYEKTDAEEKRNKSNKLPGR

Intron Amino Acid Position:
447

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1.3
75
38.1

Major BPS
71.4
0.53
1.4
71.4
45.1

Major PPT
73.9
0.54
0.8
68.4
31.6

Minor 5ss
40.9
-1
2.8
48.4
41.2

Minor BPS
71.8
0.76
1.6
86.41
39

Associated Gene:

Gene:
MYRFL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36909376 - 36936506
27131