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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_3696263_3696705_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
3696263 - 3696705
Intron Length:
443

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAACAGTT
5'SS Class:
major
3'SS Sequence:
TGTTGTTCTGTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGTTTAT
U12 Branch Point Sequence:
TGATTGTTTATT
Flanking Amino Acid:
KKSALDEIMELEEEKKRISR
Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.7
1.1
78.9
35.3
Major BPS
81.3
0.78
1.1
71.7
44.6
Major PPT
78.9
0.65
0.8
73.9
36.8
Minor 5ss
41.9
-0.9
3.5
64.8
46.5
Minor BPS
47.3
-0.1
2.3
68.65
42.8

Associated Gene:

Gene:
KIN
Ensembl Gene ID:
ENSAPLG00000008247
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000008591
3692459 - 3705860
13402