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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3703277_3704190_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3703277 - 3704190

Intron Length:
914

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTTTG

5'SS Class:
major

3'SS Sequence:
TTTATCCCCTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTCCTAAAAT

Flanking Amino Acid:
NPQQFLNYFSEEFRNDFLEL

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1
72.5
39.9

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
69.1
0.43
1
72.8
32.3

Minor 5ss
45.1
-0.5
2.8
54.8
43.4

Minor BPS
75.3
0.87
1.7
93.4
34.6

Associated Gene:

Gene:
KIN

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3692459 - 3705860
13402