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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3705696_3706281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3705696 - 3706281

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACGGGA

5'SS Class:

major

3'SS Sequence:

CTTTAATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CCCACTTTAATT

Flanking Amino Acid:

GAAVALYQPAWGQVRNMATL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

56.7

42.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

84.5

0.78

0.8

81.4

34.9

Minor 5ss

34.3

-1.8

3.6

43.9

45.7

Minor BPS

61.8

0.45

1.4

67.54

44.3

Associated Gene:

Gene:

ATP5F1C

Ensembl Gene ID:

ENSAPLG00000007987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047679

3704832 - 3712111

7280

ENSAPLT00000008325

3704832 - 3712631

7800