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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3710074_3711127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3710074 - 3711127

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

TAATTTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CCCACCTTAATT

Flanking Amino Acid:

TAMDNASKNASEMIDKLTLT

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

70.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.1

0.57

0.9

67.4

43.1

Minor 5ss

34.8

-1.7

3.1

45.9

42.4

Minor BPS

67.1

0.61

1.4

71.97

45.5

Associated Gene:

Gene:

ATP5F1C

Ensembl Gene ID:

ENSAPLG00000007987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047679

3704832 - 3712111

7280

ENSAPLT00000017814

3704832 - 3712111

7280

ENSAPLT00000008325

3704832 - 3712631

7800