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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3711225_3712627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3711225 - 3712627

Intron Length:

1403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTTTGCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTTGATT

Flanking Amino Acid:

LIEIISGAAAL*

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.3

0.75

0.8

76.4

32.3

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

62.1

0.46

1.5

80.55

35.2

Associated Gene:

Gene:

ATP5F1C

Ensembl Gene ID:

ENSAPLG00000007987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008325

3704832 - 3712631

7800