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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37157894_37158009_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37157894 - 37158009

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGAATATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TCCTGTTGAATA

Flanking Amino Acid:

LGQKGNRKTCSPIKVSHFEA

Intron Amino Acid Position:

1683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

74.6

0.55

70.7

43.9

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

48.9

-0

1.9

59.09

41.8

Associated Gene:

Gene:

PTPRB

Ensembl Gene ID:

ENSAPLG00000013391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024261

37148170 - 37206747

58578

ENSAPLT00000023708

37146965 - 37206747

59783

ENSAPLT00000014019

37148170 - 37191646

43477