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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37166082_37166555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37166082 - 37166555

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTATGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTCTTTCTATGT

Flanking Amino Acid:

TNTANAEGRTAPSPPNSVSF

Intron Amino Acid Position:

1262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

73.8

0.59

1.3

72.8

Major PPT

81.1

0.7

0.8

77.8

29.8

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

45.3

-0.2

2.1

67.24

44.2

Associated Gene:

Gene:

PTPRB

Ensembl Gene ID:

ENSAPLG00000013391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024261

37148170 - 37206747

58578

ENSAPLT00000023708

37146965 - 37206747

59783

ENSAPLT00000014019

37148170 - 37191646

43477