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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37174575_37176712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37174575 - 37176712

Intron Length:

2138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTATTT

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TCCTCAGTAACA

Flanking Amino Acid:

SNWTSVEGRTVPAQVTGLTV

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

74.6

36.4

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

83.8

0.76

0.8

77.6

36.1

Minor 5ss

42.9

-0.8

3.4

65.4

45.7

Minor BPS

51.1

0.03

2.3

68.02

44.4

Associated Gene:

Gene:

PTPRB

Ensembl Gene ID:

ENSAPLG00000013391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024261

37148170 - 37206747

58578

ENSAPLT00000023708

37146965 - 37206747

59783

ENSAPLT00000014019

37148170 - 37191646

43477