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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3718516_3728012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3718516 - 3728012

Intron Length:

9497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

GRGCHRYCELYGRTDPILDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

61.3

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.2

0.95

0.7

88.3

28.9

Minor 5ss

28.6

-2.5

3.1

31.9

42.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

TAF3

Ensembl Gene ID:

ENSAPLG00000010030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046451

3718350 - 3806958

88609

ENSAPLT00000010448

3718350 - 3830929

112580