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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37205397_37206692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37205397 - 37206692

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TTCTCTGGGATT

Flanking Amino Acid:

VFTCFALMSSEGFLIIHVQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

88.8

0.87

0.7

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

47.4

-0.1

2.1

70.85

41.1

Associated Gene:

Gene:

PTPRB

Ensembl Gene ID:

ENSAPLG00000013391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024261

37148170 - 37206747

58578

ENSAPLT00000023708

37146965 - 37206747

59783