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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37278369_37338178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37278369 - 37338178

Intron Length:

59810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTCATTTGAACT

Flanking Amino Acid:

PIPATNVIVVTLQMDVNKLN

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

61.5

0.44

1.5

76.87

39.8

Associated Gene:

Gene:

PTPRR

Ensembl Gene ID:

ENSAPLG00000014776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015425

37207467 - 37348307

140841