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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37576584_37578244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37576584 - 37578244

Intron Length:

1661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

ACTTGAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GCTACTTGAAAT

Flanking Amino Acid:

AFAGLFSLKVLMLQNNQLRQ

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

60.1

0.23

53.1

40.3

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

52.6

0.16

1.6

67.85

42.5

Associated Gene:

Gene:

LGR5

Ensembl Gene ID:

ENSAPLG00000015737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016406

37526350 - 37615570

89221