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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37610122_37611115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37610122 - 37611115

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

ATTGCAGTATCA

Flanking Amino Acid:

RKDVGLLQIQDERDFEDFLL

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

68.5

0.46

73.3

28.9

Major PPT

74.9

0.56

0.7

68.5

25.3

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

43.7

-0.4

2.4

62.68

43.5

Associated Gene:

Gene:

LGR5

Ensembl Gene ID:

ENSAPLG00000015737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016406

37526350 - 37615570

89221