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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37645921_37646363_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

37645921 - 37646363

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

TTTAAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ATTTCTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

65.1

40.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

59.6

0.22

1.1

53.4

43.8

Minor 5ss

31.1

-2.2

3.2

40.1

45.4

Minor BPS

71.8

0.76

1.5

85.98

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016854

37637420 - 37652848

15429