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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37648079_37650021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37648079 - 37650021

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGATCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTCTTCTGATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

78.9

0.65

0.9

72.1

37.8

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

61.2

0.43

1.7

80.23

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016854

37637420 - 37652848

15429