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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37677141_37677182_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37677141 - 37677182

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAACCCGC

5'SS Class:

major

3'SS Sequence:

GGAGGAGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGCAAC

U12 Branch Point Sequence:

CCGCCCGGAGGA

Flanking Amino Acid:

WGRSRGGERGGGGGGGGAGF

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.2

44.5

Major BPS

41.3

-0.5

1.3

39.9

38.1

Major PPT

36.5

-0.7

1.6

21.2

35.9

Minor 5ss

33.4

-1.9

4.1

45.6

Minor BPS

33.8

-1.2

2.2

36.89

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040196

37672305 - 37677696

5392