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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37704835_37705137_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37704835 - 37705137

Intron Length:
303

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGCCCT

5'SS Class:
strong_major

3'SS Sequence:
TTTGTCACTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
TTTGTCTGAAAA

Flanking Amino Acid:
KKRIDSEYKEGGQRNWLQVF

Intron Amino Acid Position:
128

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.9
75.3
40.8

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
77.8
0.63
0.8
75.5
34.3

Minor 5ss
40.5
-1.1
3.1
57.5
46.7

Minor BPS
59.8
0.31
1.7
73.17
38.4

Associated Gene:

Gene:
TMEM19

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37696366 - 37709160
12795

37686766 - 37709160
22395

37696456 - 37707762
11307