Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_37706666_37708996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37706666 - 37708996

Intron Length:

2331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCTTTTTAAAAT

Flanking Amino Acid:

SYLGATMQYSGFDKNTGMVV

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

77.7

31.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

42.6

-0.8

3.1

56.7

42.1

Minor BPS

52.1

0.14

1.8

68.86

42.4

Associated Gene:

Gene:

TMEM19

Ensembl Gene ID:

ENSAPLG00000002431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042213

37696366 - 37709160

12795

ENSAPLT00000029715

37686766 - 37709160

22395