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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37777016_37778918_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37777016 - 37778918

Intron Length:
1903

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAACTTGT

5'SS Class:
major

3'SS Sequence:
TATTTTTCCCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TGTTTCTTATCT

Flanking Amino Acid:
DYIKQSIFKGGLCHTLRKEA

Intron Amino Acid Position:
327

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1.2
69.7
43.7

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
80.2
0.68
0.8
74.1
36.3

Minor 5ss
47
-0.3
2.6
58.7
45.8

Minor BPS
73.9
0.83
1.5
88.38
36.6

Associated Gene:

Gene:
TBC1D15

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37755912 - 37787443
31532