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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37785197_37785772_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37785197 - 37785772

Intron Length:
576

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTAAGT

5'SS Class:
major

3'SS Sequence:
AATGTATTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAA

U12 Branch Point Sequence:
TATTTGTGAATG

Flanking Amino Acid:
KHYGFNEILKHINELSMKID

Intron Amino Acid Position:
571

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
68.5
42.3

Major BPS
72.1
0.55
1.2
63.4
44.3

Major PPT
75.4
0.57
1
70.8
43.7

Minor 5ss
34.2
-1.8
3.2
50.1
45.7

Minor BPS
48.8
-0.2
2.2
60.85
41.4

Associated Gene:

Gene:
TBC1D15

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37755912 - 37787443
31532