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Intron Name: Anas_platyrhynchos_platyrhynchos_1_37841284_37848538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37841284 - 37848538

Intron Length:

7255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATGGTTTAACA

Flanking Amino Acid:

GLLSSIGELKHALSDKAKVK

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.7

0.78

0.9

80.8

36.4

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

60.6

0.33

1.9

71.96

40.5

Associated Gene:

Gene:

TPH2

Ensembl Gene ID:

ENSAPLG00000003421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045384

37797490 - 37849591

52102

ENSAPLT00000039933

37797490 - 37868723

71234

ENSAPLT00000003534

37797490 - 37867780

70291