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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38020874_38037862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38020874 - 38037862

Intron Length:

16989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGACTA

5'SS Class:

major

3'SS Sequence:

TCATTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TTTTCCTGTATC

Flanking Amino Acid:

RVFDWIAYKKGAALIRMLAN

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

67.8

39.3

Major BPS

70.5

0.51

1.3

41.2

Major PPT

78.1

0.63

0.8

72.7

31.9

Minor 5ss

28.7

-2.4

3.3

38.1

46.8

Minor BPS

65.5

0.47

1.8

79.56

35.6

Associated Gene:

Gene:

TRHDE

Ensembl Gene ID:

ENSAPLG00000004571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029862

37922647 - 38121350

198704

ENSAPLT00000004697

37922647 - 38121350

198704