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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38054711_38057236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38054711 - 38057236

Intron Length:

2526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTTCTTGAAG

Flanking Amino Acid:

RNDLWNTLSKALKRVGKSVN

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.2

39.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

84.8

0.78

0.9

87.3

23.7

Minor 5ss

36.4

-1.5

3.4

50.2

46.4

Minor BPS

70.3

0.49

1.5

75.29

36.5

Associated Gene:

Gene:

TRHDE

Ensembl Gene ID:

ENSAPLG00000004571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046425

37922647 - 38121350

198704

ENSAPLT00000028386

37922647 - 38121350

198704

ENSAPLT00000028276

37922647 - 38121350

198704

ENSAPLT00000004697

37922647 - 38121350

198704