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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38099226_38099735_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38099226 - 38099735

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACTGTTA

5'SS Class:

weak_major

3'SS Sequence:

TTAATTCGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

KSLVQASYQHEELRREVIML

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.1

53.4

40.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.1

0.34

1.1

62.2

Minor 5ss

40.6

-1.1

3.5

51.1

46.7

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

TRHDE

Ensembl Gene ID:

ENSAPLG00000004571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029862

37922647 - 38121350

198704

ENSAPLT00000028386

37922647 - 38121350

198704

ENSAPLT00000028276

37922647 - 38121350

198704

ENSAPLT00000004697

37922647 - 38121350

198704

ENSAPLT00000046425

37922647 - 38121350

198704