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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38114671_38118888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38114671 - 38118888

Intron Length:

4218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

ACTCTCTGAATC

Flanking Amino Acid:

FREKWKILNARYGEALFMNS

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

69.8

0.49

37.5

Major PPT

83.7

0.76

0.8

76.9

31.9

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

56.9

0.2

1.4

62.68

36.8

Associated Gene:

Gene:

TRHDE

Ensembl Gene ID:

ENSAPLG00000004571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028386

37922647 - 38121350

198704

ENSAPLT00000028276

37922647 - 38121350

198704

ENSAPLT00000004697

37922647 - 38121350

198704

ENSAPLT00000046425

37922647 - 38121350

198704

ENSAPLT00000029862

37922647 - 38121350

198704