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Intron Name: Anas_platyrhynchos_platyrhynchos_1_381815_396606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

381815 - 396606

Intron Length:

14792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCACG

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTCTGTGTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.5

44.9

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.6

0.71

0.9

75.5

38.4

Minor 5ss

38.6

-1.3

49.6

46.4

Minor BPS

43.6

-0.5

2.5

62.32

44.3

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046