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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3826487_3829923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3826487 - 3829923

Intron Length:

3437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCTTTGCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TTTCTTTGCACC

Flanking Amino Acid:

VVTETVSTYVIRDEWGNQIW

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

76.1

0.59

0.9

70.4

40.1

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

49.3

-0

1.9

37.6

Associated Gene:

Gene:

TAF3

Ensembl Gene ID:

ENSAPLG00000010030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010448

3718350 - 3830929

112580