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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38308334_38308823_R

Intron Information:

Intron Rank:

138755

Intron Class:

major

Intron Phase:

Intron Coordinates:

38308334 - 38308823

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAGTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.7

0.71

0.8

76.1

32.1

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

63.1

0.49

1.5

77.29

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044151

38308058 - 38309666

1609