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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38316155_38319636_F

Intron Information:

Intron Rank:

124684

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38316155 - 38319636

Intron Length:

3482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CACACATACCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTTTTTTACACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.07

0.9

43.6

36.3

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

49.8

0.06

2.1

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045817

38310107 - 38319674

9568