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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38316155_38322227_F

Intron Information:

Intron Rank:

124682

Intron Class:

major

Intron Phase:

Intron Coordinates:

38316155 - 38322227

Intron Length:

6073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTGTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.7

82.2

33.3

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

62.1

0.24

1.6

67.62

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045097

38309852 - 38322302

12451