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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38647111_38650360_R

Intron Information:

Intron Rank:

139134

Intron Class:

major

Intron Phase:

Intron Coordinates:

38647111 - 38650360

Intron Length:

3250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TCCACTGCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.1

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

85.8

0.8

0.7

80.4

24.8

Minor 5ss

39.3

-1.2

2.9

51.9

44.9

Minor BPS

45.7

-0.2

2.2

64.21

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036009

38646756 - 38666100

19345

ENSAPLT00000037286

38646756 - 38672387

25632