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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38878870_38879453_F

Intron Information:

Intron Rank:

124780

Intron Class:

major

Intron Phase:

Intron Coordinates:

38878870 - 38879453

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCAGC

5'SS Class:

major

3'SS Sequence:

TGTCTGTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCATTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

67.1

44.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

80.4

0.69

0.9

77.2

37.1

Minor 5ss

35.1

-1.7

2.8

43.4

Minor BPS

56.3

0.28

1.8

75.45

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036805

38878337 - 38879963

1627