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Intron Name: Anas_platyrhynchos_platyrhynchos_1_38912032_39000329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38912032 - 39000329

Intron Length:

88298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGGTTCTGACGT

Flanking Amino Acid:

EDPYSSRAARFIAFASLFFI

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

46.5

-0.1

64.76

45.7

Associated Gene:

Gene:

KCNC2

Ensembl Gene ID:

ENSAPLG00000008754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009099

38902269 - 39001057

98789

ENSAPLT00000036019

38902269 - 39001057

98789

ENSAPLT00000030509

38902269 - 39001057

98789

ENSAPLT00000028090

38908086 - 39001057

92972

ENSAPLT00000027088

38909895 - 39001057

91163