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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39015276_39016573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39015276 - 39016573

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACC

5'SS Class:

strong_major

3'SS Sequence:

AATGCACTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATGTAATTAATG

Flanking Amino Acid:

CAKKHPLVLAGKATEEEITA

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.7

31.5

Major BPS

0.82

0.8

24.9

Major PPT

0.31

54.9

39.6

Minor 5ss

37.1

-1.5

2.6

47.1

41.2

Minor BPS

52.6

-0

1.8

60.12

41.7

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525