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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39016671_39017749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39016671 - 39017749

Intron Length:

1079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTATTTTTTTCT

Flanking Amino Acid:

NEYRKAFVRKAYMKLDFNKT

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

75.1

0.62

65.6

Major PPT

76.6

0.6

0.8

76.2

32.4

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

43.1

-0.4

3.5

75.72

41.5

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370