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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39017870_39018416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39017870 - 39018416

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATATTTTCAATT

Flanking Amino Acid:

KVFHLEVPEGDFESLWLILD

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.3

0.77

0.8

78.1

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

61.1

0.43

1.4

74.9

36.1

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370