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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39018572_39020130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39018572 - 39020130

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTC

5'SS Class:

major

3'SS Sequence:

TGTAAATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CCTTCTGTAAAT

Flanking Amino Acid:

DNSRVFKKIQGMLRETLSKR

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

73.5

35.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

67.7

0.4

63.1

42.8

Minor 5ss

39.7

-1.2

3.1

52.8

44.4

Minor BPS

52.2

0.15

2.1

72.3

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370