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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39026454_39026562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39026454 - 39026562

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

AATTATTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAGTTTTGAATT

Flanking Amino Acid:

VYEFRQFGKNRTNALPFIQK

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.2

30.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.8

0.58

0.9

69.1

40.7

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

61.2

0.43

1.4

73.2

38.2

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370