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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39030868_39034488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39030868 - 39034488

Intron Length:

3621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

MQHGVRKSEAEDVAAERRKQ

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370