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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39034612_39037989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39034612 - 39037989

Intron Length:

3378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGGC

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTAAACTTGATT

Flanking Amino Acid:

PQQCPETSIKGTQLKVGHKD

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

64.1

41.8

Major BPS

0.75

78.6

Major PPT

0.67

0.9

76.5

37.7

Minor 5ss

37.2

-1.4

3.4

52.5

44.7

Minor BPS

61.9

0.45

1.5

77.85

38.3

Associated Gene:

Gene:

CAPS2

Ensembl Gene ID:

ENSAPLG00000011831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020719

39014934 - 39046458

31525

ENSAPLT00000012318

39016083 - 39045452

29370