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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39047877_39048476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39047877 - 39048476

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTGAA

5'SS Class:

major

3'SS Sequence:

TGTGCATTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TGTCCAGTAATT

Flanking Amino Acid:

GLDKSENKMTDVNHICNEKL

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

70.6

35.2

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

66.5

0.37

1.1

68.6

41.4

Minor 5ss

-2.2

3.3

40.5

45.6

Minor BPS

49.7

0.06

2.2

75.64

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028384

39046229 - 39053667

7439