Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_39052753_39053501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39052753 - 39053501

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCGCGG

5'SS Class:

major

3'SS Sequence:

TTCAATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTCTCATTT

Flanking Amino Acid:

GPHDPRAQHGGSPQAVHQVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.3

46.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.7

0.49

1.1

75.2

38.4

Minor 5ss

34.6

-1.7

3.5

47.8

47.7

Minor BPS

54.8

0.23

1.8

77.31

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028384

39046229 - 39053667

7439