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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39066862_39068741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39066862 - 39068741

Intron Length:

1880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATGCCTATTA

Flanking Amino Acid:

NPPASNMFRMSWDPALAKSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

83.1

0.74

0.9

79.1

32.9

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

46.5

-0.2

2.2

64.8

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026406

39066682 - 39072889

6208

ENSAPLT00000025845

39066682 - 39072889

6208

ENSAPLT00000012430

39066682 - 39072889

6208