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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39070813_39072188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39070813 - 39072188

Intron Length:

1376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGACCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCACACCTAATT

Flanking Amino Acid:

SNDKCVDKLCGYDNWYPDWD

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

61.7

42.8

Major BPS

0.87

0.8

85.6

Major PPT

71.4

0.48

1.1

74.8

39.1

Minor 5ss

32.4

-2

37.9

40.5

Minor BPS

49.5

0.04

1.9

68.37

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025845

39066682 - 39072889

6208