Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_39098774_39100279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39098774 - 39100279

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTGT

5'SS Class:

major

3'SS Sequence:

TTTTACCGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTTTTTACCG

Flanking Amino Acid:

KEKPVVKAKKASTEKKIDIE

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

43.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

75.1

0.57

0.9

70.6

35.8

Minor 5ss

0.14

2.6

74.1

42.2

Minor BPS

61.4

0.22

1.7

67.13

Associated Gene:

Gene:

KRR1

Ensembl Gene ID:

ENSAPLG00000016378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017095

39098154 - 39103710

5557