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Intron Name: Anas_platyrhynchos_platyrhynchos_1_39239317_39239671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39239317 - 39239671

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

ATGTAAACAACT

Flanking Amino Acid:

DEEGEEADDEEGEEEADEEN

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

86.6

0.82

0.7

85.5

29.2

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

43.9

-0.3

2.1

66.55

43.1

Associated Gene:

Gene:

NAP1L1

Ensembl Gene ID:

ENSAPLG00000016178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020364

39237392 - 39252759

15368

ENSAPLT00000016895

39237392 - 39252759

15368